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Microbes & Immunity                                               Big data and DNN-based DTI model in CHP



            typically promotes apoptosis and stress responses through   degradation of mitotic cyclins and other proteins, allowing
            JNK and p38α/β in MAPK. In contrast, AKT activation   the cell to exit mitosis and enter the G1 phase.  While not
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            promotes cell survival and growth, also controlling   a direct substrate of CDH1, the regulation of CDK activity
            gene expression related to apoptosis, survival, and   by CDH1 indirectly affects CDC25A function.  Proper
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            inflammation. JNK phosphorylates TF c-Jun, a major   degradation of cyclins and other regulators ensures that
            component  of AP1.  Phosphorylation  increases c-Jun’s   CDKs are only activated by CDC25A at the appropriate
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            transcriptional activity, enhancing  AP1-mediated gene   time. This process can inhibit CDC25A, preventing
            expression.  While TF JunD is less responsive to JNK   the activation of CDKs and halt cell cycle progression.
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            phosphorylation compared to TF c-Jun, it can still   Simultaneously, these checkpoints can influence the
            participate in AP1 complexes regulated by JNK activity.   activity  of  CDH1  to ensure  that  mitotic regulators are
            Moreover, JNK stress-induced signals that activate JNK can   properly degraded.  Subsequently, CDC25A removes
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            enhance the transcriptional activity of AP1 components   inhibitory phosphates from threonine-14 and tyrosine-15
            that incorporate TF JunD, thereby influencing regulated   on CDK2.  This dephosphorylation is necessary for the
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            target genes NFAT/AP1.  The NFAT-AP1-JNK axis plays   activation of the CDK2/cyclin complexes, which also
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            a critical role in T-cell activation and differentiation.   promotes the initiation of DNA replication, and ensures
            The integration of signals from these pathways ensures   proper cell cycle progression and genomic stability.
            the proper transcriptional regulation of cytokines and   CDK2 activity ensures proper DNA replication, while
            other immune-related genes. The activation of target   CDC20 regulates the exit from mitosis, ensuring that cells
            gene  AP1 by JNK in response to stress can lead to the   only  progress through  the  cell  cycle when  all  necessary
            expression of inflammation and apoptosis. This response   conditions are met.  Once CDC20 ubiquitinates Securin,
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            is modulated by the interaction with NFAT, allowing for   the degradation of Securin releases the enzyme separase
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            a  balanced  cellular  reaction  to  stress.   Consequently,   from its inhibition. Active separase can then cleave cohesin
            CXCL1  activation  subsequently  induces  the  expression   complexes, allowing the sister chromatids to separate
            of pro-inflammatory genes, including CXCR2 ligands,   and ensure proper cell division. During interphase and
            and promotes cancer cell migration. CXCL1 can activate   early  mitosis,  Securin binds to separase  and  inhibits its
            these small GTPases through the PI3K pathway, initiating   protease  activity.   This  binding  prevents  separase  from
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            downstream signaling events, such as the activation of p38   cleaving cohesin complexes that hold sister chromatids
            MAPK and PAKs. 62                                  together. 63  Sep arase is activated at the onset of anaphase
              In summary, the CXCL1 chemokine represents a     and cleaves the cohesin complex to allow chromosome
            network of proteins in Figure 4 that interacts with genes   segregation, while STAG3-containing cohesin complexes
            NFAT2,  NFAT4, and  AP1, and TF JunD through JNK   maintain  the  cohesion  of  sister  chromatids  during  the
            signals that orchestrate various downstream signaling   early stages of meiosis, ensuring proper alignment and
            pathways, including those involved in chemotaxis,   recombination. Abnormal expression of target gene STAG3
            inflammation, and cancer cell migration. Elucidating the   in somatic cells can interfere with the normal cohesin
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            intricate interplay within this chemo synapse is crucial for   complex function, potentially affecting cell proliferation.
            understanding the multifaceted roles of receptor CXCR2   Therefore,  in  vitro  cell  experiments  have  shown  that
            in physiological and pathological processes.       CDC23 can promote the proliferation of myogenic cells
                                                               and significantly upregulate the differentiation of skeletal
            3.3.2. The role of cell division cycle 23 in cell cycle   muscle satellite cells. The PPI network shows a high level of
            regulation and potential implications in CHP       interaction between CDC23 and cell cycle pathway-related
            Cell division  cycle  23  is  a  component of the   genes like STAG3. Subsequently, in CDC23-overexpressed
            tetratricopeptide repeat (TPR) subunits in the anaphase-  differentiated myogenic cells, the level of CDC23 was
            promoting  complex/cyclosome  (APC/C)  complex,    significantly negatively correlated with the expression
            involved in regulating mitosis in eukaryotes.  Receptor   of key factors in the cell cycle pathway, suggesting that
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            cyclin-dependent kinase 1 (CDK1) not only regulates   CDC23 may be involved in inhibiting cell cycle signaling
            the timing of APC/C activation to ensure proper mitotic   pathways, thereby promoting differentiation.
            entry, progression, and exit but also controls the initiation   The APC/C, through CDC23 and other components,
            of  mitosis,  whereas  cadherin-1  (CDH1)  regulates   regulates the cell cycle, ensuring proper cell division and
            the exit from mitosis and the maintenance of the G1   function. Dysregulation in cell cycle control can influence
            phase (cell cycle). In late mitosis and G1 phase, CDH1   immune cell proliferation and function, potentially
            becomes dephosphorylated and can bind to APC/C,    impacting  the  inflammatory  and  immune  responses
            thereby activating it. This leads to the ubiquitination and   seen in CHP. Compared to control cells, CDC23,


            Volume 2 Issue 2 (2025)                         96                               doi: 10.36922/mi.4620
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