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Gene & Protein in Disease





                                        ORIGINAL RESEARCH ARTICLE
                                        Effects of DNA methylation and gene expression

                                        on rats with protein malnutrition in early life



                                        Zhi Qu , Liying Fu , Chenchen Wang , Suting Liu , and Bo Li *
                                              1
                                                                                   1
                                                                                            1
                                                                        1
                                                       1,2
                                        1 Institute of Chronic Disease Risks Assessment, School of Nursing and Health, Henan University,
                                        Kaifeng, 475004, P. R. China
                                        2 Henan Provincial People’s Hospital, Henan Provincial Eye Hospital, People’s Hospital of Zhengzhou
                                        University, People’s Hospital of Henan University, Zhengzhou, 450003, China

                                        Abstract
                                        Although the mechanisms underlying how malnutrition in early life affects the
                                        susceptibility to diseases later in life remain unclear, there is considerable interest in
                                        the potential role of DNA methylation in the intrauterine programming of diseases.
                                        In this study, digital gene expression profiles were used to analyze changes in gene
                                        expression of protein-restricted rats early in life, while intergenerational rat models
                                        were used to explore differences in whole blood genomic DNA methylation in an
                                        environment stimulated by maternal protein intervention. Nine rats were randomly
                                        divided into early-life low-protein group (LPE), fetal low-protein group (LPF), and
                                        normal control group (CON). The LPE group was fed a low-protein diet on the 1  day
                                                                                                         st
                                        of pregnancy until the end of lactation. The LPF group was given low-protein diet
                                        during pregnancy. The CON group was given a 20% protein diet from the 1  day of
                                                                                                       st
                                        pregnancy. Total mRNA was extracted from the sacrificed rats at the 48  week. The
                                                                                                   th
                                        number of differentially expressed genes for LPE versus CON, LPF versus CON, and
                                        LPF versus LPE was 178, 223, and 302, respectively. Comparing LPE versus CON and
            *Corresponding author:
            Bo Li                       LPF versus CON, the upregulated genes common to the two groups were Gimap-
            (10210022@vip.henu.edu.cn)  9, Serinc-4, Dnah-2, Sf3b-5, and Sat-2, and the downregulated genes were Ppp1r-3.
            Citation: Qu Z, Fu L, Wang C, et al.,   Comparing LPF versus CON and LPF versus LPE, the upregulated genes were Mgat2
            2022,  Effects of DNA methylation   and Cars, and the downregulated genes were Ddx28 and Slc12a9. The differentially
            and gene expression on rats with   expressed genes were mainly related to cell metabolism, immune response,
            protein malnutrition in early life.
            Gene Protein Dis, 1(2):169.   signaling pathway, endocrine metabolism, stress response, ATP binding, and other
            https://doi.org/10.36922/gpd.v1i2.169   functions. Early-life protein malnutrition affects gene expression of rat offspring and
                                        involves multiple aspects of growth and development, with different stages of early-
            Received: August 6, 2022
            Accepted: October 12, 2022   life malnutrition leading to altered DNA methylation expression of corresponding
            Published Online: November 4, 2022  genes, mainly in mitochondrial genes.
            Copyright: © 2022 Author(s).
            This is an Open-Access article
            distributed under the terms of the   Keywords: Rats; Early life; Protein; Malnutrition; Gene expression; Genome-wide
            Creative Commons Attribution   DNA methylation
            License, permitting distribution,
            and reproduction in any medium,
            provided the original work is
            properly cited.
                                        1. Introduction
            Publisher’s Note: AccScience
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            Volume 1 Issue 2 (2022)                         1                      https://doi.org/10.36922/gpd.v1i2.169
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