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Gene & Protein in Disease





                                        ORIGINAL RESEARCH ARTICLE
                                        A new gene signature associated with pyroptosis

                                        for identifying high-risk myeloma patients



                                                  1,2
                                         Yaner Wang , Qi Wang , Zhenqian Huang , and Xinliang Mao 1,2,3 *
                                                                             3
                                                            2
                                        1 Institute of Clinical Pharmacology, Science and  Technology Innovation Center, Guangzhou
                                        University of Chinese Medicine, Guangzhou, China
                                        2 Guangdong and Guangzhou Key Laboratory of Protein Modification and Degradation, School of
                                        Basic Medical Sciences, Guangzhou Medical University, Guangzhou, China
                                        3 Department of Hematology,  The First  Affiliated Hospital of Guangzhou Medical University,
                                        Guangzhou, China




                                        Abstract
                                        Multiple myeloma (MM) is a complicated hematologic malignancy of plasma
                                        cells. However, the existing stratification systems cannot accurately predict the
                                        prognosis of MM. This study aims to evaluate the role of pyroptosis in identifying
                                        high-risk MM patients. RNA expression profiles were obtained from the Cancer
                                        Genome Atlas-MMRF CoMMpass and GTEx databases, which were treated as MM
                                        cases and controls, respectively. By applying univariate Cox regression analysis and
                                        consensus clustering, 20 pyroptosis-related genes (PRGs) were initially identified to
                                        effectively stratify MM patients into two distinct subgroups. To identify prognostic
                                        gene signature, a stepwise LASSO regression analysis was conducted following by
                                        univariate and multivariate Cox regression analyses. We identified a set of signature
            *Corresponding author:      genes – CASP3, CHMP2A, CHMP3, CHMP6, GZMB, CASP8, NOD2, PLCG1, and FOXO3 –
            Xinliang Mao
            (xinliangmao@gzhmu.edu.cn)  that could significantly distinguish MM patients based on overall survival. We further
                                        identified that the risk score can serve as an independent prognostic indicator. The
            Citation: Wang Y, Wang Q,   same prognostic model was also successfully constructed in the internal test cohort.
            Huang  Z, Mao X. A new gene
            signature associated with pyroptosis   Thus, a prognostic risk model for clinically predicting the survival rate of MM patients
            for identifying high-risk myeloma   was established. Single-sample gene set enrichment analysis was employed to
            patients. Gene Protein Dis.   analyze immune infiltrating cells and immune-related pathways between two risk
            2024;3(4):4534.
            doi: 10.36922/gpd.4534      groups. Moreover, the mRNA expression levels of the prognostic risk signature genes
                                        were confirmed by quantitative reverse-transcription polymerase chain reaction in
            Received: August 15, 2024
                                        MM cells treated with the pyroptosis-inducing agent etoposide. In conclusion, we
            Accepted: December 3, 2024  identified a 9-PRG signature that enables effective stratification of MM patients and
            Published Online: December 17,   serves as an independent prognostic marker. These findings underscore the need for
            2024                        further exploration of pyroptosis in MM therapy.
            Copyright: © 2024 Author(s).
            This is an Open-Access article
            distributed under the terms of the   Keywords: Multiple myeloma; Pyroptosis; Signature gene; Prognosis
            Creative Commons Attribution
            License, permitting distribution,
            and reproduction in any medium,
            provided the original work is
            properly cited.             1. Introduction
            Publisher’s Note: AccScience   Multiple Myeloma (MM) is a plasma cell malignancy more commonly affecting
            Publishing remains neutral with   the elderly individuals.  The average age at diagnosis of MM patients is 69  years,
                                                           1
            regard to jurisdictional claims in
            published maps and institutional   according to the annual report of American Cancer Society website (Key Statistics
            affiliations.               About MM). The annual global incidence is approximately 2/100,000 people, making

            Volume 3 Issue 4 (2024)                         1                               doi: 10.36922/gpd.4534
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