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International Journal of Bioprinting                                  Printing organoids in peptide matrices




            1× PBS, an RNA purification kit (Thermo Fisher Scientific,   microscope (EVOS; Thermo Fisher Scientific, USA). The
            USA) was used to lyse the cells and extract RNAs, according   proliferation  of  cells  after  3D  printing  was  performed
            to the manufacturer’s instructions (n = 5).        using an adenosine triphosphate (ATP) cell proliferation
                                                               assay  (CellTiter-Glo 3D;  Promega,  USA),  following the
            2.13.2. Quantitative reverse transcription polymerase   manufacturer’s recommendations. Briefly, 100 µL of
            chain reaction                                     proliferation reagent was added to each printed structure in
            Complementary DNA was transcribed from extracted   the 96-well plate, mixed vigorously, and left for incubation
            RNA with a High Capacity cDNA Reverse Transcription   in the dark for 30 min. Luminescence was measured using
            Kit (Thermo Fisher Scientific, USA) using a Mastercycler   the PHERAstar FS Microplate Reader (BMG LABTECH,
            proS (Eppendorf, Germany). Thereafter, polymerase chain   Germany). GraphPad prism (Dotmatics, USA) was used
            reaction (PCR) was conducted using a QuantStudio 7 Flex   for data analysis, and results are represented as mean ±
            Real-Time  PCR System  with  TaqMan  Gene  Expression   standard  deviation.  Statistical  analysis  was  performed
            Assay (GAPDH, CHGA, EPCAM, LGR5, and MUC2) and     using two-way analysis of variance (ANOVA), and values
            TaqMan Fast Advanced Master Mix from Thermo Fisher   with p < 0.05 were considered statistically significant.
            Scientific  (USA).  GAPDH  was  used  as  a  housekeeping
            gene for normalization. Matrigel is used as the control to   3. Results
            calculate Cycle threshold (CT). A t-test was conducted to
            determine statistically significant differences at p = 0.01,   3.1. Physicochemical characterization of peptide
            0.001, and 0.0001 (n = 15).                        combinations
                                                               Previous studies have analyzed the fiber-forming capacity
            2.14. Evaluation of printability and               of the parent tetrapeptide IIFK.  This peptide comprises a
                                                                                        36
            bioprinted organoids                               hydrophobic tail of nonpolar amino acids (Ile [I] and Phe
            Printing and bioprinting processes were conducted with   [F]) and a positively charged amino acid (Lys [K]) at the
            an in-house-developed robotic 3D bioprinter composed of   C-terminal, making it an amphiphilic sequence. This parent
            a five-degrees-of-freedom robotic arm, a custom-designed   peptide self-assembles into well-ordered supramolecular
            dual-coaxial nozzle, microfluidic pumps, and a stirring hot   nanofibers. 34,36  Peptides FIB and LAM were obtained after
            plate. The robotic arm was interfaced with Repetier-Host.   the parent peptide was decorated with sequences RGDS
                                                 ®
            The printing files were designed in SolidWorks  (Dassault   and YIGSR, respectively. Based on previous studies,  we
                                                                                                         37
            Systemes,  France)  and  sliced  into  G-codes  using  Slic3r   determined that mixtures of decorated peptides and the
            and Repetier software (Hot-World GmbH, Germany). The   parent peptide enabled the formation of fibrous structures.
            dual-coaxial nozzle was fabricated according to literature.    Therefore, we generated specific combinations utilizing the
                                                         25
            The commercial microfluidic pumps were controlled   parent peptide and biofunctional peptides (Table 1) to be
            simultaneously using the automated pulse mode. The   evaluated. We defined mixtures based on low (0.5 mg/mL)
            selected flow rates were 40–45 μL/min (peptide), 20–25 μL/  and  high  (1.0 mg/mL)  concentrations  of  biofunctional
            min (5× or 7× PBS, depending on the peptide sequence),   peptides FIB and LAM. These were mixed with a fixed
            and 15 μL/min (1× PBS with the extracted cells) for each of   concentration (1.0 mg/mL) of parent peptide.
            the pumps, respectively.
                                                                  The physicochemical characterization of peptides
               Gelation tests of different peptide concentrations after   and peptide combinations matrices was performed to
            printing were conducted using 2, 4, and 6 mg/mL FIB (low)   elucidate the properties of the hydrogels formed. SEM
            peptide mixture and 1.5, 3, and 6 mg/mL LAM (high)   and AFM were used to characterize the morphology
            peptide mixture (Table 1). Bioprinting was conducted   of the hydrogels; Raman spectroscopy was used to
            using 4.5 mg/mL LAM and 6 mg/mL FIB. The cells were   characterize the secondary structure of the hydrogel
            mixed with 600 μL of 1× PBS and loaded into the printer.   nanofibers; rheology assessment was performed to get
            The  bioprinted  constructs  were  cultured  for  7 days  and   an insight into the mechanical properties of the different
            subsequently analyzed with phase contrast (EVOS M7000;   peptide combinations. Images obtained by SEM and AFM
            Invitrogen, Invitrogen, USA) and laser scanning confocal   demonstrated that all conditions can form supramolecular
            microscopes (ZEISS LSM 880 with Airyscan) (ZEISS,   assemblies in the form of long nanofibers (Figure 1a and
            Germany), as described above.                      b). SEM imaging further suggests that fibers intertwine
               The viability of 3D-bioprinted cells was assessed using   in multiple dimensions. AFM topography derived the
            the LIVE/DEAD Viability/Cytotoxicity Kit (Thermo Fisher   characteristic nanofiber lengths from combined solutions
            Scientific, USA) as described above. Stained printed cell-  (Table 2). For instance, FIB-containing nanofibers have
            laden constructs were imaged using an immunofluorescent   a larger diameter than LAM-containing nanofibers.
                                                               Interestingly, the highest variability in helical periodicity


            Volume 10 Issue 5 (2024)                       345                                doi: 10.36922/ijb.3033
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