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INNOSC Theranostics and
            Pharmacological Sciences                                              Transcriptome-based RNA sequencing



               synovial RNA sequencing identifies gene-gene interactions   methylation datasets identify valuable biomarkers
               predictive of response in rheumatoid arthritis. Arthritis Res   for  rheumatoid  arthritis  progression.  Oncotarget.
               Ther. 2022;24(1):166.                              2018;9(3):2977.
               doi: 10.1186/s13075-022-02803-z                    doi: 10.18632/oncotarget.22918
            52.  Zhang R, Jin Y, Chang C,  et al. RNA-Seq and network   62.  Xing X, Xia Q, Gong B, Shen Z, Zhang Y. Identification of
               analysis reveal unique chemokine activity signatures in the   tissue-specific expressed hub genes and potential drugs in
               synovial tissue of patients with rheumatoid arthritis. Front   rheumatoid  arthritis  using  bioinformatics  analysis.  Front
               Med (Lausanne). 2022;9:799440.                     Genet. 2022;13:855557.
               doi: 10.3389/fmed.2022.799440                      doi: 10.3389/fgene.2022.855557
            53.  Jiang H, Cao K, Fan C, Cui X, Ma Y, Liu J. Transcriptome-  63.  Zhang R, Yang X, Wang J, et al. Identification of potential
               wide high-throughput m6A sequencing of differential m6A   biomarkers for differential diagnosis between rheumatoid
               methylation patterns  in the  human rheumatoid  arthritis   arthritis and osteoarthritis via integrative genome-wide gene
               fibroblast-like synoviocytes cell line MH7A. J Inflamm Res.   expression profiling analysis. Mole Med Re. 2019;19(1):30-40.
               2021;14:575-586.
                                                                  doi: 10.3892/mmr.2018.9677
               doi: 10.2147/JIR.S296006
                                                               64.  Chen Y, Li H, Lai L, Feng Q, Shen J. Identification of common
            54.  Stephenson W, Donlin LT, Butler A, et al. Single-cell RNA-  differentially expressed genes and potential therapeutic
               seq of rheumatoid arthritis synovial tissue using low-cost   targets in ulcerative colitis and rheumatoid arthritis. Front
               microfluidic instrumentation. Nat Commun. 2018;9(1):791.  Genet. 2020;11:572194.
               doi: 10.1038/s41467-017-02659-x                    doi: 10.3389/fgene.2020.572194
            55.  Singh JA, Saag KG, Bridges SL Jr.,  et  al. 2015 American   65.  Wang X, Xia S, Fu B. RNA-seq analysis of synovial
               College of Rheumatology guideline for the treatment of   fibroblasts in human rheumatoid arthritis.  Mol Med
               rheumatoid arthritis. Arthritis Rheumatol. 2016;68(1):1-26.  Rep. 2014;10(1):241-247.
               doi: 10.1002/art.39480                             doi: 10.3892/mmr.2014.2182
            56.  Myasoedova E, Crowson CS, Kremers HM, Therneau TM,   66.  Qian S, Sun S, Zhang L, et al. Integrative analysis of DNA
               Gabriel SE. Is the incidence of rheumatoid arthritis rising?:   methylation identified 12  signature  genes specific  to
               Results from Olmsted County, Minnesota, 1955-2007.   metastatic ccRCC. Front Oncol. 2020;10:556018.
               Arthritis Rheum. 2010;62(6):1576-1582.
                                                                  doi: 10.3389/fonc.2020.556018
               doi: 10.1002/art.27425
                                                               67.  Aihaiti Y, Tuerhong X, Ye JT, Ren XY, Xu P. Identification
            57.  Drosos AA, Pelechas E, Voulgari PV. Radiological   of pivotal genes and pathways in the synovial tissue of
               findings of the cervical spine in rheumatoid arthritis:   patients with rheumatoid arthritis and osteoarthritis
               What a rheumatologist should know.  Curr Rheumatol   through integrated bioinformatic analysis.  Mol Med
               Rep. 2020;22:19.                                   Rep. 2020;22(4):3513-3524.
               doi: 10.1007/s11926-020-00894-8                    doi: 10.3892/mmr.2020.11406
            58.  Groves C, Chandramohan M, Chew NS, Aslam T, Helliwell PS.   68.  Lewis MJ, Barnes MR, Blighe K, et al. Molecular portraits
               Clinical examination, ultrasound and MRI imaging of the   of early rheumatoid arthritis identify clinical and treatment
               painful elbow in psoriatic arthritis and rheumatoid arthritis:   response phenotypes. Cell Rep. 2019;28(9):2455-2470.e5
               Which is better, ultrasound or MR, for imaging enthesitis?
               Rheumatol Therapy. 2017;4:71-84.                   doi: 10.1016/j.celrep.2019.07.091
               doi: 10.1007/s40744-017-0053-7                  69.  Guo Q, Wang Y, Xu D, Nossent J, Pavlos NJ, Xu J.
                                                                  Rheumatoid arthritis: Pathological mechanisms and
            59.  Jones PA. Functions of DNA methylation: Islands, start sites,   modern pharmacologic therapies. Bone Res. 2018;6(1):15.
               gene bodies and beyond. Nat Rev Genet. 2012;13(7):484-492.
                                                                  doi: 10.1038/s41413-018-0016-9
               doi: 10.1038/nrg3230
                                                               70.  Jang S, Kwon EJ, Lee JJ. Rheumatoid arthritis: Pathogenic
            60.  Brandt B, Rashidiani S, Bán Á, Rauch TA. DNA methylation-
               governed  gene  expression  in  autoimmune  arthritis.  Int  J   roles of diverse immune cells. Int J Mol Sci. 2022;23(2):905.
               Mole Sci. 2019;20(22):5646.                        doi: 10.3390/ijms23020905
               doi: 10.3390/ijms20225646                       71.  Malemud CJ. Intracellular signaling pathways in rheumatoid
                                                                  arthritis. J Clin Cellular Immunol. 2013;4:160.
            61.  Fang G, Zhang QH, Tang Q, Jiang Z, Xing S, Li J, Pang Y.
               Comprehensive  analysis  of  gene  expression  and  DNA      doi: 10.4172/2155-9899.1000160


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