Page 71 - GPD-3-4

Gene & Protein in Disease Drugs and immune infiltration in IPF

doi: 10.1093/nar/gkq1056 deacetylation regulate the transcription of VIPR1 in
hepatocellular carcinoma. Biochem Biophys Res Commun.
14. Agarwal V, Bell GW, Nam JW, Bartel DP. Predicting effective
microRNA target sites in mammalian mRNAs. Elife. 2019;509(1):301-305.
2015;4:e05005. doi: 10.1016/j.bbrc.2018.12.129
doi: 10.7554/eLife.05005 26. Tang B, Wu J, Zhu MX, et al. VPAC1 couples with TRPV4
channel to promote calcium-dependent gastric cancer
15. Chen B, Khodadoust MS, Liu CL, Newman AM,
Alizadeh AA. Profiling tumor infiltrating immune cells progression via a novel autocrine mechanism. Oncogene.
with CIBERSORT. Methods Mol Biol. 2018;1711:243-259. 2019;38(20):3946-3961.
doi: 10.1038/s41388-019-0709-6
doi: 10.1007/978-1-4939-7493-1_12
27. Zhao L, Yu Z, Zhao B. Mechanism of VIPR1 gene regulating
16. Liu Y, Yang X, Gan J, Chen S, Xiao ZX, Cao Y. CB-Dock2: human lung adenocarcinoma H1299 cells. Med Oncol.
Improved protein-ligand blind docking by integrating cavity 2019;36(11):91.
detection, docking and homologous template fitting. Nucleic
Acids Res. 2022;50(W1):W159-W164. doi: 10.1007/s12032-019-1312-y
doi: 10.1093/nar/gkac394 28. Heljasvaara R, Aikio M, Ruotsalainen H, Pihlajaniemi T.
Collagen XVIII in tissue homeostasis and
17. Morse C, Tabib T, Sembrat J, et al. Proliferating SPP1/ dysregulation - Lessons learned from model organisms and
MERTK-expressing macrophages in idiopathic pulmonary human patients. Matrix Biol. 2017;57-58:55-75.
fibrosis. Eur Respir J. 2019;54(2):1802441.
doi: 10.1016/j.matbio.2016.10.002
doi: 10.1183/13993003.02441-2018
29. Wang S, Zhou M, Xia Y. COL15A1 interacts with P4HB to
18. Kumar A, Elko E, Bruno SR, et al. Inhibition of PDIA3 regulate the growth and malignancy of HepG2.2.15 cells.
in club cells attenuates osteopontin production and lung Biochem Biophys Res Commun. 2023;681:20-28.
fibrosis. Thorax. 2022;77(7):669-678.
doi: 10.1016/j.bbrc.2023.09.031
doi: 10.1136/thoraxjnl-2021-216882
30. Yu DH, Ruan XL, Huang JY, et al. Analysis of the interaction
19. Rosas IO, Richards TJ, Konishi K, et al. MMP1 and MMP7
as potential peripheral blood biomarkers in idiopathic network of hub miRNAs-Hub genes, being involved in
pulmonary fibrosis. PLoS Med. 2008;5(4):e93. idiopathic pulmonary fibers and its emerging role in non-
small cell lung cancer. Front Genet. 2020;11:302.
doi: 10.1371/journal.pmed.0050093
doi: 10.3389/fgene.2020.00302
20. Zuo F, Kaminski N, Eugui E, et al. Gene expression analysis
reveals matrilysin as a key regulator of pulmonary fibrosis in mice 31. Jin CY, Zheng R, Lin ZH, et al. Study of the collagen type VI
and humans. Proc Natl Acad Sci U S A. 2002;99(9):6292-6297. alpha 3 (COL6A3) gene in Parkinson’s disease. BMC Neurol.
2021;21(1):187.
doi: 10.1073/pnas.092134099
doi: 10.1186/s12883-021-02215-7
21. Tartaglione A, Oneto A, Bandini F, Favale E. Visual evoked
potentials and pattern electroretinograms in Parkinson’s 32. Chen J, Luo SF, Yuan X, et al. Diabetic kidney disease-
disease and control subjects. J Neurol Neurosurg Psychiatry. predisposing proinflammatory and profibrotic genes
1987;50(9):1243-1244. identified by weighted gene co-expression network analysis
(WGCNA). J Cell Biochem. 2022;123(2):481-492.
doi: 10.1136/jnnp.50.9.1243
doi: 10.1002/jcb.30195
22. Cui H, Guo Z, Guo Z, et al. TMEM100 regulates neuropathic 33. Saradna A, Do DC, Kumar S, Fu QL, Gao P. Macrophage
pain by reducing the expression of inflammatory factors. polarization and allergic asthma. Transl Res. 2018;191:1-14.
Mediators Inflamm. 2023;2023:9151967.
doi: 10.1016/j.trsl.2017.09.002
doi: 10.1155/2023/9151967
34. Huen SC, Moeckel GW, Cantley LG. Macrophage-specific
23. Song JJ, Hwang I, Cho KH, et al. Plasma carboxypeptidase deletion of transforming growth factor-β1 does not prevent
B downregulates inflammatory responses in autoimmune renal fibrosis after severe ischemia-reperfusion or obstructive
arthritis. J Clin Investig. 2011;121(9):3517-3527.
injury. Am J Physiol Renal Physiol. 2013;305(4):F477-F484.
doi: 10.1172/JCI46387
doi: 10.1152/ajprenal.00624.2012
24. Ray K. CPB2 dampens inflammation in autoimmune 35. Craig VJ, Zhang L, Hagood JS, Owen CA. Matrix
arthritis. Nat Rev Rheumatol. 2011;7(10):558.
metalloproteinases as therapeutic targets for idiopathic pulmonary
doi: 10.1038/nrrheum.2011.135 fibrosis. Am J Respir Cell Mol Biol. 2015;53(5):585-600.
25. Lu S, Lu H, Jin R, Mo Z. Promoter methylation and H3K27 doi: 10.1165/rcmb.2015-0020TR

Volume 3 Issue 4 (2024) 13 doi: 10.36922/gpd.4101