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Microbes & Immunity Brachyspira pilosicoli novel outer membrane proteins

Table 1. (Continued)
Locus identifier Protein name a SignalP PSORTb CELLO TMBETADISC. OMPdb MCMBB Tmbed No. of
RBF_AADP Match β-strands b
BP951000_RS01090 Variable surface + + + + − + + 14
protein (VspH)
BP951000_RS06935 Hypothetical protein + − + + − + + 12
BP951000_RS11380 Toxin A + U + + − + + 12
BP951000_RS03405 Hypothetical protein + U + + − + + 12
BP951000_RS00185 Hypothetical protein + + + + − + + 12
BP951000_RS10320 Hypothetical protein + U + + − + + 10
BP951000_RS05445 DUF3575 domain- + U + + − + + 8
containing protein
BP951000_RS08300 Tia invasion + U + − + + + 8
determinant
BP951000_RS05490 Tia invasion + U + + − + + 8
determinant
BP951000_RS07500 Hypothetical protein + − + + − + + 8
BP951000_RS01590 Hypothetical protein − − + + − + + 8
BP951000_RS08295 Tia invasion + U − − + + + 8
determinant
BP951000_RS08975 TonB-dependent + U + + − + + 13
receptor domain-
containing protein
BP951000_RS06930 Serpentine receptor − − − + − + + 8
domain-containing
protein
BP951000_RS03290 Serpentine receptor + − + + − + + 8
domain-containing
protein
BP951000_RS00765 Serpentine receptor + + + + − + + 8
domain-containing
protein
BP951000_RS01280 Serpentine receptor + + + + − + + 8
domain-containing
protein
BP951000_RS10445 Serpentine receptor + + + + − + + 8
domain-containing
protein
BP951000_RS00365 Serpentine receptor + U + + − + + 8
domain-containing
protein
BP951000_RS04620 Serpentine receptor + + + + − + + 8
domain-containing
protein
BP951000_RS04220 Serpentine receptor + − + + − + + 8
domain-containing
protein
Notes: Protein names follow annotations in the National Center for Biotechnology Information and UniProt databases, retrieved using protein
a
b

accession numbers (accessed on March 28, 2024). The number of β-strands was predicted using AlphaFold 3.“U” indicates an unknown output from
PSORTb, where the tool could not determine the exact cellular localization of the protein. “+” denotes a positive result, and “−” represents a negative
result as reported by the respective computational tool.
Abbreviations: DUF: Domain of unknown function; OMBB: Outer membrane β-barrel; OMP: Outer membrane protein; Trep: transcriptional
regulating protein.

Volume 2 Issue 4 (2025) 85 doi: 10.36922/MI025230050