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Tumor Discovery                                                   A bioinformatics analysis of PD-1 in cancers



            the immune escape of tumors. The interaction between   time to relapse), progression-free survival (PFS, time to
            PD-1 and PD-L1 plays a key role in maintaining immune   progression), overall survival (OS, time to death), post-
            homeostasis  in  normal  tissues.  The  expression  level  of   progression survival (PPS), and disease specific survival
            PD-1 in the peripheral blood T cells of tumor patients is   (DSS, time to death from the same cancer). At present, the
            higher than that of normal people [4,5] . The combination   database contains gene expression data of diverse tumor
            of PD-1 and PD-L1 on the surface of T lymphocytes   types, including liver cancer, bladder carcinoma, breast
            inhibits the anti-tumor immune response of lymphocytes,   cancer, cervical squamous cell carcinoma, esophageal
            promotes the occurrence of tumor immune escape, and   adenocarcinoma, esophageal squamous cell carcinoma,
            thus promotes the occurrence of tumors . In the tumor   head-neck squamous cell carcinoma, kidney renal clear
                                             [6]
            microenvironment, the combination of PD-1 and PD-L1   cell carcinoma, kidney renal papillary cell carcinoma, liver
            can engender a variety of biological effects, such as inhibition   hepatocellular carcinoma, lung adenocarcinoma, lung
            of the release of inflammatory factors, inhibition of the   squamous cell carcinoma, ovarian cancer, pancreatic ductal
            proliferation and activation of lymphocytes, weakening of   adenocarcinoma, pheochromocytoma and paraganglioma,
            the surveillance of immune microenvironment, and tumor   rectum adenocarcinoma, sarcoma, stomach adenocarcinoma,
            cell recurrence. PD-1/PD-L1 antibodies can block the   testicular germ cell tumor, thymoma, thyroid carcinoma, and
            PD-1/PD-L1 signaling pathway to enhance the response of   uterine corpus endometrial carcinoma. There is a collection
            T cells and activate anti-tumor immunity to regulate anti-  of clinicopathological features, including TNM stage, gender,
            tumor activity. This is also one of the main mechanisms by   race, and mutation burden. Other special clinicopathological
            which tumor cells evade the immune system [7,8] .  features  include  vascular  invasion,  sorafenib  treatment,
              Compared to normal tissues, the number of PD-1-  alcohol consumption, and hepatitis virus in liver cancer.
            positive T cells is higher in gastric cancer, kidney cancer,   3. Results
            melanoma, and other malignant tumors and is positively
            correlated with tumor progression [9-11] . PD-1 is localized   3.1. Prognostic val ues of PD-1 in gastric cancer
            in the cytoplasm in breast cancer cells and is highly   According to Kaplan–Meier plotter (Figure 1A and Table 1,
            expressed in breast cancer tissues . According to several   P < 0.05), higher PD-1 expression was negatively associated
                                       [12]
            studies, PD-1 expression was higher in patients with liver   with the overall and PPS rates of all patients with gastric
            cancer, renal cell carcinoma, and non-small cell lung   cancer, who were stratified by Her2 positivity. Same result
            cancer  (NSCLC)  than  in  the  control  group [13-15] .  PD-1   was obtained for male patients with T2, intestinal-type
            inhibits lymphocyte proliferation and cytokine production   cancer that received 5-FU-based chemotherapy (Table 1,
            in rheumatic immune diseases, and participates in the   P < 0.05). In addition, Stage III patients with well-
            regulation of immune response, maintaining immune   differentiated cancer were also significantly associated
            tolerance in the peripheral environment in cases such as   with OS. Stages I and II and N0 patients with high PD-1
            systemic lupus erythematosus and rheumatoid arthritis .   expression had a shorter PPS time than those with low
                                                        [16]
            PD-1 expression in different tumor tissues is related to   PD-1 expression. However, higher PD-1 expression was
            prognosis, indicating that PD-1 plays an important role   positively associated with OS in patients with Stage IV, N3,
            in the occurrence and development of tumors. PD-1   diffuse-type or mixed-type cancer. Similar result in terms
            anticancer drug that has been approved by the U.S. Food   of PPS was obtained in patients with Stage IV, T4, N3, M1,
            and Drug Administration for the treatment of malignant   and diffuse-type cancer.
            melanoma and NSCLC has achieved good clinical results;
            at the same time, PD-1 treatment of liver cancer has also   3.2. Prognostic values of PD-1 in liver cancer
            entered clinical trial stage . In our study, we investigated   In liver cancer (Figure 1B and Table 2), we found that a low
                                [17]
            the clinical and prognostic values of PD-1 mRNA expression   PD-1 expression was negatively related to OS, PFS, RFS, and
            in different tumors using bioinformatics analysis.  DSS rates, even after stratification by race (OS, PFS, RFS,

            2. Materials and methods                           and DSS), gender (OS and DSS), sorafenib treatment (PFS,
                                                               RFS, and DSS), alcohol consumption (PFS and RFS), and
            The  Kaplan–Meier  (KM)  plotter  database  (https://kmplot.  hepatitis virus (RFS). In addition, non-drinking patients
            com/analysis/) is  a gene expression database,  which   were significantly correlated with OS (P < 0.05). Patients
            integrates gene expression and clinical data simultaneously.   with low PD-1 expression, who are male and were having
            We analyzed the prognostic value of PD-1 mRNA in gastric,   Stage II, Grade II/III, and AJCC-T III/IV liver cancer and
            lung, breast, and ovarian cancers. KM plotter could be   hepatitis virus infection, had shorter PFS time compared
            used to analyze the clinical impact of independent genes   with those with high expression (P < 0.05). Similar result
            on different cancers, in terms of relapse-free survival (RFS,   was seen in male patients with Stage I-II (or II/II-III/III/


            Volume 1 Issue 1 (2022)                         2                        https://doi.org/10.36922/td.v1i1.59
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