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Tumor Discovery                                             Practice and consideration of master protocol design



            master  protocols  in  these  particular  areas,  such  as   7.1.2. Subjects with multiple biomarkers
            multiple treatments investigated in a single rare disease   In master protocols designed to investigate therapies
            using a common control arm, the TCM treatment of   targeting multiple biomarkers, a challenge may arise if
            different diseases with the same syndrome, to promote   patients have positive results for multiple biomarkers
            the development of master protocols and therapies for   of  interest. The multi-biomarkers  patients  are  eligible
            patients.                                          for more than one subgroup but can only be allocated
            7. The practical considerations in master          to one of them. FDA recommends, in this case, that the
            protocol trial                                     protocol should contain a prespecified plan for allocation
                                                               of these multi-biomarkers subjects , such as the pragmatic
                                                                                          [1]
            7.1. Design considerations                         allocation to the eligible sub-study with the currently
            7.1.1. A common control arm                        fewest included patients, the random allocation to one
                                                               of the eligible sub-studies . In practice, Lung-MAP
                                                                                     [64]
            When a sponsor tends to evaluate multiple therapies   trial assigned patients using a prespecified plan that the
            simultaneously in a single disease, such as umbrella trials,   groups for biomarkers with lower prevalence receive more
            FDA recommends that the sponsor use a common control   patients . Notably, some researchers argue that patients
                                                                     [23]
            arm of SOC to improve efficiency in randomized trials .   with multiple biomarkers might be underrepresented in
                                                        [1]
            The SOC may change over time as newer drugs develop,   some sub-studies, and the variety of schemes for allocation
            possibly affecting a long-running master protocol. This   could hamper the interpretation, thus proposing some
            occurred in Lung-MAP when nivolumab was approved,   methods to handle this problem, such as using random or
            which is superior to the SOC (docetaxel) selected for   pragmatic sub-study allocation .
                                                                                        [64]
            the biomarker-matched  sub-studies. When comparing
            several therapies to a common control group, the test   7.2. Ethical consideration
            statistics will be correlated, which will lead to a lower   Patients tend to give their informed consent early in the
            probability of at least one false positive rejection than   clinical trial, which is usually based on scarce protocol
            independent trials with a dedicated control group for each   information. With more complicated informed consent
            comparison [62,63] . Therefore, consistent with the standard   caused  by  the  increasing  complexity  and  length  of
            setting of a series of separate studies, the multiplicity   the master protocol trial, patients cannot thoroughly
            adjustment as regards the Type I error rate would not be   understand these documents and the trial concept to
            a need for sub-studies comparing several active therapies   give truly informed consent. As the trial progresses, the
            to the same control group. This would be reinforced by   settings not yet fully established might change because
            the fact that different therapies would support separate   of the characteristics of master protocol designs . The
                                                                                                       [65]
            and specific claims of efficacy even investigated globally   Declaration of Helsinki considers it crucial and ethically
            within the same trial .                            obligatory that each informed consent document guarantee
                             [62]
              However, another type of error rate led using a common   that if new information having an impact on benefits or
            control group should be recognized. In master protocol   risks becomes available, this information is shared with
                                                                                                           [66]
            sub-studies  comparing multiple  therapies  to a  common   the patients, and patients are asked to re-consent .
            control group, corresponding regulatory decisions are   One  approach  is that patients  could  be  informed  about
            correlated using a common control group, which may   recruitment status during the informed consent process
            inflate the chance of simultaneous multiple false positive   and choose another sub-study with an already established
            regulatory decisions . For example, if the control group   setting. Such an approach would involve the patients more
                            [62]
            obtained weak results by chance, the statistical tests may   in the decision-making process, which will challenge both
                                                                                   [65]
            then be significant for many of the therapy comparisons,   patients and investigators .
            even with no treatment effect for these therapies; if the   7.3. Statistics considerations
            control group obtained overoptimistic results by chance,
            few of the therapies could exhibit a statistically significant   7.3.1. The multiplicity issue
            effect, even in the case of true efficacy . In summary, the   Multiplicity is the Type  I error rate inflation from a
                                          [19]
            chance of multiple simultaneous false positive regulatory   multiple-testing problem. From the regulatory perspective,
            decisions might increase in the case of a common control   it has to be adjusted at an acceptable level when several tests
            group. To reduce it, there are some strategies such as   are performed simultaneously for decision-making about
            lower individual values of the Type I error rate for each   efficacy.  In  master  protocol  trials,  the  master  protocol-
            comparison, and more randomized patients to the    wise error (MPWE) rate is referred to as the probability
            control arm .                                      of declaring at least one of the sub-studies of the master
                     [62]

            Volume 2 Issue 2 (2023)                         15                          https://doi.org/10.36922/td.342
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