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Tumor Discovery                                                     CTC characterization for EGFR mutations




            Table 5. (Continued)
            Patient ID Exon EGFR  EGFR mutation in CTCs      Percentage of mutations  Exon EGFR  EGFR mutation  Matched
                       CTC                                    detected using NGS  biopsy  tumor biopsy  (Yes or No)
            39          19    Deletion (E746_A750delELREA)         5.83                 WT          No
                        20    T790M                                0.83
                        18    N700D                                0.69
            40          19    Deletion (E746_A750delELREA)         19.67          21    L858R       No
                        20    L841P                                1.4
            43          19    Deletion (E746_A750delELREA)         2.43                 WT          No
                        21    V843L                                0.53
            53          19    Deletion (E746_A750delELREA)         8.47                 WT          No
            54          19    Deletion (E746_A750delELREA)         1.11                 WT          No
            55          19    Deletion (E746_A750delELREA)         14.34                WT          No
            56          19    Deletion (E746_A750delELREA)         3.26                 WT          No
                        20    R766H                                0.92
            57          19    Deletion (E746_A750delELREA)         32.64                WT          No
            58          19    Deletion (E746_A750delELREA)         22.85                WT          No
            59          19    Deletion (E746_A750delELREA)         1.66           21    L858R       No
            Abbreviations: WT: Wild-type (no mutation detected); CTCs: Circulating tumor cells; EGFR: Epidermal growth factor receptor; NGS: Next-generation
            sequencing. The bold values represent mutations/deletions on exons 18-21 of the EGFR gene.

                                                               and has also been associated with partial response to
                                                               erlotinib. 57,62-64  A K708R mutation has been reported
                                                               in ovarian cancers where it has been associated with
                                                               abnormal phosphorylation of AKT and ERK.  It has
                                                                                                      62
                                                               also been reported once in a Chinese study  but never in
                                                                                                  65
                                                               Caucasian populations; thus, the response of this mutation
                                                               to TKIs is not clear. These patient-specific point mutations
                                                               will potentially offer new insights into treatment responses
                                                               and should be analyzed in a large cohort.
                                                                 The marked disparity in the number of mutations
                                                               detected in CTCs (78.95%) when compared to matched
                                                               tumor biopsies (13.3%) reported in the current study
                                                               differs from that published in other studies. Most of these
                                                               studies  report a  similarity in  the  number  of mutations
                                                               in matched CTC and tumor biopsy samples,  38,39,46
            Figure 7. Epidermal growth factor receptor (EGFR) mutations present and/
            or absent in matched circulating tumor cells (CTCs) and tumor biopsy   whereas some studies have reported a lower number of
            samples. Statistical analysis from Fisher’s exact test showing that the CTC +   mutations in CTC samples than in matched tumor biopsy
            next-generation sequencing (NGS) sampling technique detected significantly   samples. 37,66,67  However, both groups of studies highlighted
            more mutations (P = 0.0173) than cobas  EGFR mutation analysis of the   above only analyzed CTCs for EGFR mutations in patients
                                     
            matched tumor biopsy. In addition, the likelihood of detecting mutations in   whose tumor biopsy samples were positive for a mutation.
            EGFR from the CTC + NGS matrix was 1.855 (Fisher’s exact test).
                                                               Conversely, the current study analyzed samples “blindly,”
              Rare mutations detected in the present study (e.g.,   i.e., CTC samples were analyzed for mutations from all
            L792P, C797S, H506R, and L591R) have been reported   patients before the mutational status of the biopsy was
            previously in NSCLC with clinical correlations. L591R   known, rather than only focusing on patients with a biopsy
            has been associated with drug response to gefitinib, 31,60-63    containing mutations.
            and C795S mutation has been linked to resistance to   The discordance in the type of mutations observed in
            osimertinib. 31,62  D761N mutation has been reported   three of the four patients who had a mutation detected in
            in biopsies of NSCLC and colon and prostate cancers,   both CTCs and biopsies was similar to that observed in



            Volume 3 Issue 4 (2024)                         12                                doi: 10.36922/td.3987
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