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Journal of Clinical and
            Translational Research                                                  ROCK inhibition in chronic rejection



            whereas 310 genes were downregulated exclusively in   some of the genes downregulated by Rezurock and the
            Rezurock-treated macrophages (Figure  3A and  B). The   Rezurock/fingolimod combination, but not by fingolimod
            genes downregulated after combination treatment were   alone. We previously published the expression data of
            related to extracellular matrix organization, blood vessel   these fibrosis-related proteins (some selected from Table 1
            development, neutrophil degranulation, cell–cell adhesion,   and others from independent fibrosis studies) following
            and cytokine production (Figure  3C;  Table S5). The   treatment with Rezurock or fingolimod separately.  Here,
                                                                                                       10
            downregulated genes specific to Rezurock treatment were   we compared the expression of fibrotic pathway-related
            involved in lipid metabolism, atherosclerosis, hemostasis,   proteins in control (DMSO-treated), Rezurock-only,
            cytokine signaling, neutrophil signaling, lipid localization,   fingolimod-only, and Rezurock/fingolimod combination-
            and regulation of the actin cytoskeleton (Figure  3D;   treated treatment.
            Table S6). The genes downregulated in both Rezurock   We evaluated the expression levels of ROCK1, ROCK2,
            and combination treatments were related to the cell   Notch1, PTX3, collagen Type I, CCL2, CCR2, and TGF-
            cycle, translation, chromosome organization, regulation   β1 in RAW 264.7 mouse macrophages (Figure  6). We
            of cellular stress, adaptive immune response, and   found that the expression of ROCK1, ROCK2, Notch1,
            chromosome segregation (Figure 3E; Table S7). Among the   and collagen Type  I was similar across Rezurock
            upregulated genes, 357 were unique to Rezurock treatment
            (Figure  4A and  B), 821 were uniquely upregulated after   alone,  fingolimod  alone,  and  the  Rezurock/fingolimod
            Rezurock/fingolimod treatment, and 1,554 genes were   combination treatments. However, for PTX3, CCL2,
            shared between the two treatments. The genes upregulated   CCR2, and TGF-β1, the combination treatment had a
            only after combination treatment were related to Golgi   much stronger inhibitory effect compared to either drug
            vesicle transport, histone modification, the Rho GTPase   alone (Figure 6). We also analyzed the protein expression
            pathway, protein modification, DNA methylation, and   of ROCK1, ROCK2, and Notch1 following Rezurock,
            the mitogen-activated protein kinase signaling pathway   fingolimod, and combination treatment in HMDMs
            (Figure 4C; Table S8). The genes shared between Rezurock   (Figure 7). All three treatments reduced the levels of these
            and combination treatments were associated with protein   proteins. However, the Rezurock/fingolimod combination
            processing in the endoplasmic reticulum (ER), metabolic   was significantly more effective at reducing Notch1 and
            processes, autophagy, GTPase activity, and membrane   ROCK2 expression in HMDMs than either individual
            trafficking (Figure 4D; Table S9). The genes upregulated   treatment.
            only in Rezurock-treated macrophages were related to   In addition, we performed GO enrichment analysis
            ER-to-Golgi transport, lysozyme pathway, fatty acyl-  of  Stat3/Stat5-related pathways among DEGs in
            coenzyme A synthesis, membrane lipid metabolism,   macrophages treated with Rezurock, fingolimod, or their
            protein localization to the ER, neutrophil degranulation,   combination (Figure  8;  Tables S13-S15). Macrophages
            and apoptotic signaling (Figure 4E; Table S10).    treated with either drug, or the combination, exhibited
              In summary, treatment with Rezurock/fingolimod   differential modulation of immune-related pathways.
            had a more pronounced effect on the mouse macrophage   GO enrichment analysis revealed significant changes in
            transcriptome than individual treatment with either   cytokine signaling and  Stat3/Stat5-associated processes,
            Rezurock or fingolimod.  The shared 87 downregulated   with the strongest enrichment observed following
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            genes were mostly related to antigen processing, cytokine   combination treatment (Figure 8A-C). Heatmap analysis
            production, chemokine signaling, regulation of leukocyte   showed more pronounced transcriptional changes
            differentiation, cell activation, macrophage markers, G alpha   following Rezurock treatment compared to fingolimod
            signaling, and interleukin (IL)-2 production (Figure 5A-C;   alone, while the combination treatment induced the most
            Table S11). Among the upregulated genes, 35 were shared   extensive modulation, suggesting enhanced macrophage
            by all three treatment groups (Figure 5D and E). These 35   reprogramming (Figure 8D-F).
            genes were associated with protein folding, adipogenesis,
            transcription, immunoglobulin production, and cell–cell   4. Discussion
            adhesion (Figure 5F; Table S12).                   Chronic rejection of transplanted organs remains
                                                               incurable, and long-term organ survival rates continue to
            3.3. Effect of Rezurock/fingolimod combination on   be unsatisfactory.  Existing therapies primarily focus on
                                                                             3,4
            the fibrosis pathway-related proteins              inhibiting T-cell proliferation and activation to prevent
                                                                           3,4
            Rezurock prevents fibrosis more effectively than other   graft rejection.  However, we and others hypothesize that
            RhoA/ROCK inhibitors. It downregulates genes involved   targeting macrophages could offer additional therapeutic
            in fibrosis and collagen deposition pathways. Table 1 lists   benefits, as they are well-established contributors to


            Volume 11 Issue 5 (2025)                        84                         doi: 10.36922/JCTR025270036
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