Page 90 - MI-1-1
P. 90

Microbes & Immunity                                     Dynamics between phage, bacteria, and mammalian cells



            stocks were re-suspended in 200  μL Na CO /NaHCO    and 5% CO2 in the absence and presence of BEAS-2B
                                                          3
                                              2
                                                  3
            buffer (pH  9.2) and 5  μL FITC solution (5  mg/mL) for   cells for 24 h. The cultures were plated to obtain isolated
            incubation in a dark environment at room temperature   bacterial colonies. These plated colonies were sub-cultured
            with gentle shaking (100 rpm) for 2 h to allow conjugation   3 times to avoid residual free phages, and each sub-culture
            of FITC to the protein coat of the phages. Thereafter, 200   generation had three replicates. Thereafter, ten colonies
            μL solution of 20% PEG8000 with 2.5 M NaCl was added   were  selected for  the  spot  test  to  measure sensitivity
            to the samples and incubated overnight at 4°C. The samples   toward phages. Phage-resistance development was defined
            were subsequently centrifuged at 15000 ×g at 4°C for 1 h.   as no observable plaque in the spot test assay. The phage-
            The phage pellets were re-suspended in 100 μL PBS and   resistance rate was determined as:
            stored at 4°C before use. Approximately 1 × 10  BEAS-2B
                                                  5
            cells were seeded in a glass-bottom cell culture dish                   Number of colonies
            (diameter of 20 mm) with 1 mL DMEM. After overnight                      form no plaque
            incubation, the cells were cultured with 100  μL FITC-  Phage resistance rate−  =  10   ×  100%  (II)
            labeled phages. After 24-h co-culturing in the incubator
            at 37°C and 5% CO , 4% paraformaldehyde in PBS was   The adsorption rate of phages onto the phage-treated
                             2
            added to fix the cells for 30 min before the dishes were   bacteria was  also  examined  using incubating  phages
            washed 3 times with PBS to remove planktonic or loosely   with the sub-cultured bacteria for 10  min followed by
            adhered phages. The samples were then stained with   immediate centrifugation at 12000 ×g and 4°C for 5 min.
            300 nM DAPI staining solution (Thermo Fisher Scientific,   The supernatant was then collected, and serial-diluted for
            USA) at room temperature for 5 min, followed by washing   the plaque assay. Adsorbed phages were evaluated as the
            with PBS 3  times. A  fluorescence microscope (TI-DH,   difference between the initial phage titer and phage titer in
            Nikon, Japan) was used to visualize the phage adhesion at   the supernatant.
            ×40 magnification. The NIS-Elements imaging software   2.7. Cytokine secretion by BEAS-2B cells
            (version 5.01) was employed for image processing.
                                                               The level of cytokines (tumor necrosis factor-alpha
            2.5.2. Bacteria-epithelial cell adsorption assay   [TNF-α], interleukin 1-beta [IL-1β], and interleukin-6
                                                                  6
                                                      4
            BEAS-2B cells were seeded in a 96-well plate at 3 × 10  cells   [IL- ),  secreted  by  BEAS-2B  cells  toward  the  bacterial
            per well in 100 μL DMEM culture medium. After overnight   challenge, was evaluated after incubating with the bacteria
            incubation, the spent medium was removed, and the cells   with and without phage treatment for 24 h. Analysis was
            were further incubated with 100 μL bacteria (~10  CFU/  performed with commercially available inflammatory
                                                    7
            mL) at 37°C and 5% CO  for 24  h. The wells were then   biomarker ELISA kits (eBioscience, Affymetrix Inc., USA)
                                 2
            washed 3 times with PBS to remove any unadhered bacteria.   according to the manufacturer’s protocols. The experiment
            A volume of 100 μL PBS containing 0.01 mM EDTA was   was performed in three biological replicates (n = 3) and
            then added to wells for 10 min at 37°C, following vigorous   repeated two independent times.
            pipetting. The plate counting method was used to determine   2.8. Statistical analysis
            the number of viable bacteria adhered to the epithelial cells.
            The experiment was performed in biological replicates (n =   All experiments were repeated in two independent
            3) and repeated two independent times.             experiments. The number of biological replicates in each
                                                               experiment and individual assays was used to determine
              Bacterial adhesion onto the BEAS-2B cells was
            visualized with Giemsa staining. Briefly, the bacteria and   the statistically significant differences between groups.
                                                               One-way analysis of variance (ANOVA) at a confidence
            BEAS-2B co-culture were fixed with 4% paraformaldehyde   level of 95% was employed to identify any statistically
            in PBS for 30 min and subsequently stained with Giemsa   significant differences in cell and bacteria viability. p-value
            solution (1:20 dilution of stock solution) for 45 min. The   < 0.05 was considered statistically significant.
            stained co-culture was then washed with PBS 3 times for
            visualization using a fluorescence microscope (TI-DH,   3. Results
            Nikon, Japan) under the bright field visualization mode at
            ×20 magnification.                                 3.1. Effect of treatment period on antibacterial
                                                               efficiency by phage
            2.6. Phage-resistance development assay            The effects of phage addition on the antibacterial efficiency
            The frequency of bacterial variants emerging with phage   in the co-culture system were studied to mimic the scenario
            resistance was determined using incubating phages (MOI   of (i) after an infection initiated by pre-incubating bacteria
            100) with ~10  CFU/mL MDR-AB2 bacteria at 37°C     with BEAS-2B cells for 4 h; (ii) at the bacterial colonization
                        7

            Volume 1 Issue 1 (2024)                         84                               doi: 10.36922/mi.3141
   85   86   87   88   89   90   91   92   93   94   95