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Tumor Discovery                                            Pyroptosis-related genes in breast cancer progression




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            Figure 3. The expression level of the 39 pyroptosis-related genes and their interactions. (A) Heatmap (red: high expression level; blue: low expression level)
            of pyroptosis-related genes in normal (N, pale blue) and tumor tissues (T, red). (B) Protein-protein interaction network illustrating pyroptosis-related gene
            interactions (interaction score = 0.9). (C) The pyroptosis-related gene correlation network (blue line: Negative correlation; red line: Positive correlation).
            The strength of the relevance is reflected in the color depth.
            Notes: P-values: *P < 0.05; **P < 0.01; ***P < 0.001.

            protein phosphatase inhibitor (Solarbio, China) and   bands  were quantified with ImageJ  software.  Finally,
            1% phosphatase inhibitor (Beyotime, China) and were   the absolute expressions were determined, and the
            analyzed by means of western blotting using the following   data were analyzed using GraphPad Prism 8. Statistical
            antibodies: peroxidasin-like (anti-PXDNL) (YM0524,   significance was assessed as follows: *P < 0.05; **P < 0.01;
            ImmunoWay Biotechnology, America), armadillo-like   ***P < 0.001.
            helical domain-containing 1 (anti-ARMH1) (TA334858,
            Origene, China),  anti-GAPDH  (52902, Signalway    2.9. Statistical analysis
            Antibody, China), and anti-APOBEC3D/APOBEC3F       The data from the qPCR are expressed as the relative
            (PA5 – 101777, Invitrogen, China) were used. Stripping   expression in terms of 2 -ΔΔCt , while the data from the
            buffer (CW0056M [500  mL], CWBIO, China) was       western blotting are expressed as the absolute expression.
            used to remove primary and secondary antibodies    A Student’s t-test was used to compare continuous variables.
            from the imprinted membrane, enabling multiple     A  P  < 0.05 was considered statistically significant.  Data
            antibody detection on the same membrane. Protein   were analyzed using GraphPad Prism 8.




            Volume 3 Issue 3 (2024)                         5                                 doi: 10.36922/td.3469
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