Page 94 - GPD-2-1
P. 94

Gene & Protein in Disease                                                 A pan-cancer analysis of HMGB1



               group box 1. Mol Med, 9(1–2): 37–45.               https://doi.org/10.1016/j.ygeno.2020.06.044
            7.   Kang R, Zhang Q, Zeh HJ 3 , et al., 2013, HMGB1 in cancer:   18.  Fridman  WH,  Galon  J,  Dieu-Nosjean  MC, et al.,  2011,
                                   rd
               Good, bad, or both? Clin Cancer Res, 19(15): 4046–4057.   Immune infiltration in human cancer: Prognostic significance
               https://doi.org/10.1158/1078-0432.Ccr-13-0495      and disease control. Curr Top Microbiol Immunol, 344: 1–24.
            8.   Huebener P, Gwak GY, Pradere JP, et al., 2014, High-mobility      https://doi.org/10.1007/82_2010_46
               group box 1 is dispensable for autophagy, mitochondrial   19.  Steven A, Seliger B, 2018, The role of immune escape and
               quality control, and organ function  in vivo.  Cell Metab,   immune cell infiltration in breast cancer. Breast Care (Basel),
               19(3): 539–547.                                    13(1): 16–21.
               https://doi.org/10.1016/j.cmet.2014.01.014         https://doi.org/10.1159/000486585
            9.   Vargas TR, Apetoh L, 2017, Danger signals: Chemotherapy   20.  Domingues P, González-Tablas M, Otero Á, et al.,
               enhancers? Immunol Rev, 280(1): 175–193.           2016, Tumor infiltrating immune cells in gliomas and
               https://doi.org/10.1111/imr.12581                  meningiomas. Brain Behav Immun, 53: 1–15.
            10.  Gao Q, Wang S, Chen X, et al., 2019, Cancer-cell-secreted      https://doi.org/10.1016/j.bbi.2015.07.019
               CXCL11 promoted CD8(+) T cells infiltration through   21.  Chen X, Song E, 2019, Turning foes to friends: Targeting cancer-
               docetaxel-induced-release  of  HMGB1  in  NSCLC.   associated fibroblasts. Nat Rev Drug Discov, 18(2): 99–115.
               J Immunother Cancer, 7(1): 42.
                                                                  https://doi.org/10.1038/s41573-018-0004-1
               https://doi.org/10.1186/s40425-019-0511-6
                                                               22.  Kwa MQ, Herum KM, Brakebusch C, 2019, Cancer-
            11.  Tang Z, Kang B, Li C, et al., 2019, GEPIA2: An enhanced web   associated fibroblasts: How do they contribute to metastasis?
               server for large-scale expression profiling and interactive   Clin Exp Metastasis, 36(2): 71–86.
               analysis. Nucleic Acids Res, 47(W1): W556–W560.
                                                                  https://doi.org/10.1007/s10585-019-09959-0
               https://doi.org/10.1093/nar/gkz430
                                                               23.  Biffi G, Tuveson DA, 2021, Diversity and biology of cancer-
            12.  Chen F, Chandrashekar DS, Varambally S, et al., 2019, Pan-  associated fibroblasts. Physiol Rev, 101(1): 147–176.
               cancer molecular subtypes revealed by mass-spectrometry-
               based proteomic characterization of more than 500 human      https://doi.org/10.1152/physrev.00048.2019
               cancers. Nat Commun, 10(1): 5679.               24.  Kumari T, Kumar B, 2018, High-mobility group box  1
               https://doi.org/10.1038/s41467-019-13528-0         protein (HMGB1) gene polymorphisms and cancer
                                                                  susceptibility:  A  comprehensive  meta-analysis.  Clin Chim
            13.  Gao J, Aksoy BA, Dogrusoz U, et al., 2013, Integrative   Acta, 483: 170–182.
               analysis of complex cancer genomics and clinical profiles
               using the cBioPortal. Sci Signal, 6(269): pl1.      https://doi.org/10.1016/j.cca.2018.04.042
                                                                                     rd
               https://doi.org/10.1126/scisignal.2004088       25.  Tang D, Kang R, Zeh HJ 3 , et al., 2010, High-mobility group
                                                                  box 1 and cancer. Biochim Biophys Acta, 1799(1–2): 131–140.
            14.  Jiao XD, Qin BD, You P, et al., 2018, The prognostic value of
               TP53 and its correlation with EGFR mutation in advanced      https://doi.org/10.1016/j.bbagrm.2009.11.014
               non-small cell lung cancer, an analysis based on cBioPortal   26.  Sims GP, Rowe DC, Rietdijk ST, et al., 2010, HMGB1 and
               data base. Lung Cancer, 123: 70–75.                RAGE in inflammation and cancer.  Annu Rev Immunol,
               https://doi.org/10.1016/j.lungcan.2018.07.003      28: 367–388.
            15.  Cerami E, Gao J, Dogrusoz U, et al., 2012, The cBio      https://doi.org/10.1146/annurev.immunol.021908.132603
               cancer genomics  portal: An open platform for exploring   27.  Andersson  U,  Tracey  KJ,  2011, HMGB1  is  a therapeutic
               multidimensional  cancer  genomics  data.  Cancer Discov,   target for sterile inflammation and infection.  Annu  Rev
               2(5): 401–404.                                     Immunol, 29: 139–162.
               https://doi.org/10.1158/2159-8290.Cd-12-0095
                                                                  https://doi.org/10.1146/annurev-immunol-030409-101323
            16.  Bardou P, Mariette J, Escudié F, et al., 2014, jvenn: An   28.  Stros M, 2010, HMGB proteins: Interactions with DNA and
               interactive Venn  diagram viewer.  BMC Bioinformatics,   chromatin. Biochim Biophys Acta, 1799(1–2): 101–113.
               15(1): 293.
                                                                  https://doi.org/10.1016/j.bbagrm.2009.09.008
               https://doi.org/10.1186/1471-2105-15-293
                                                               29.  Lange SS, Vasquez KM, 2009, HMGB1: The jack-of-all-
            17.  Cui X, Zhang X, Liu M, et al., 2020, A pan-cancer analysis   trades protein is a master DNA repair mechanic.  Mol
               of the oncogenic role of staphylococcal nuclease domain-
               containing protein 1 (SND1) in human tumors. Genomics,   Carcinog, 48(7): 571–580.
               112(6): 3958–3967.                                 https://doi.org/10.1002/mc.20544


            Volume 2 Issue 1 (2023)                         12                        https://doi.org/10.36922/gpd.301
   89   90   91   92   93   94   95   96   97   98   99